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ERX10245933: Illumina MiSeq paired end sequencing
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 369.2M bases, 188.7Mb downloads

Submitted by: finnish national institute for health and welfare
Study: Legionella pneumophila sg 1 outbreak connected to city water network, Finland 2021
show Abstracthide Abstract
We report a Legionella pneumophila sg1 outbreak in Kuopio, Finland with 12 Legionnaires' disease cases between Jan 2020 - May 2021. Sources of infection were identified to be 9 residential building waters systems (9 cases, 1 in each apartment building) and one hospital water system (3 cases). Water isolates (shower) and patient isolates matched with a maximum of 2/1443 allele cgMLST difference. We have uploaded 5 sequences representing all different sequence profiles of the outbreak strain originating from 4 homes and a hospital.
Sample: Lp 1
SAMEA112354844 • ERS14465780 • All experiments • All runs
Library:
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.2M spots, 369.2M bases, 188.7Mb
Run# of Spots# of BasesSizePublished
ERR107973881,244,296369.2M188.7Mb2023-01-25

ID:
26359744

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